5.7 – Chapter 5 – References
Chapter 5 references and suggested readings
Alvarez, J. A., Garten, K. M., & Cook, D. G. (2021). Limb malformation in a foothill yellow-legged frog (Rana boylii) from Sonoma county, California. Northwestern Naturalist, 102(3), 258-260.
Beck, D. D., Dohm, M. R., Garland, T., Ramírez-Bautista, A., & Lowe, C. H. (1995). Locomotor performance and activity energetics of helodermatid lizards. Copeia, 3, 575-585.
Benson K, Hartz AJ (2000) A Comparison of Observational Studies and Randomized, Controlled Trials. The New England Journal of Medicine 342:1878-1886
Berger, R. L. (1990). Nazi science—the Dachau hypothermia experiments. New England journal of medicine, 322(20), 1435-1440.
Bhatt A. (2010). Evolution of clinical research: a history before and beyond James Lind. Perspectives in clinical research, 1(1), 6–10.
Binford, C. H. (1936). The history and study of leprosy in Hawaii. Public Health Reports (1896-1970), 415-423.
Blainey, P., Krzywinski, M., & Altman, N. (2014). Points of significance: replication. Nature Methods 11, 879–880.
Bozkurt, B., Kamat, I., & Hotez, P. J. (2021). Myocarditis with COVID-19 mRNA vaccines. Circulation, 144(6), 471-484.
Brandt, A. M. (1978). Racism and research: the case of the Tuskegee Syphilis Study. Hastings center report, 21-29.
Bulova, S. J. (1994). Ecological correlates of population and individual variation in antipredator behavior of two species of desert lizards. Copeia, 980-992.
Bumpus, H. C. 1898. Eleventh lecture. The elimination of the unfit as illustrated by the introduced sparrow, Passer domesticus. (A fourth contribution to the study of variation.) Biological Lectures: Woods Hole Marine Biological Laboratory, 209-225. (link to volume at Google Books)
Concato J, Shah N, Horwitz RI (2000) Randomized, controlled trials, observational studies, and the hierarchy of research designs. New England Journal of Medicine 342:1887-1892
Couper, M. P., & Miller, P. V. (2008). Web survey methods: Introduction. Public Opinion Quarterly, 72(5), 831-835.
Cox KL, Puddey IB, Morton AR, Burke V, Beilin LJ, McAleer M. (1996). Exercise and weight control in sedentary overweight men: effects on clinic and ambulatory blood pressure. Journal of Hypertension14:779-790.
Cumming, G., Fidler, F., & Vaux, D. L. (2007). Error bars in experimental biology. The Journal of Cell Biology, 177(1), 7-11.
Darveau C-A, Hochachka PW, Welch Jr KC, Roubik DW, Suarez RK (2005) Allometric scaling of flight energetics in Panamanian orchid bees: a comparative phylogenetic approach. Journal of Experimental Biology 208:3581-3591
Dawsey, S. P., Hollenbeck, A., Schatzkin, A., & Abnet, C. C. (2014). A prospective study of vitamin and mineral supplement use and the risk of upper gastrointestinal cancers. PLoS One, 9(2), e88774.
Diez Roux, A. V. (2004). The study of group-level factors in epidemiology: rethinking variables, study designs, and analytical approaches. Epidemiologic reviews, 26(1), 104-111.
Dohm, M. R., Garland Jr, T., Cole, C. J., & Townsend, C. R. (1998). Physiological variation and allometry in western whiptail lizards (Cnemidophorus tigris) from a transect across a persistent hybrid zone. Copeia, 1-13.
Dohm, M. R., Richardson, C. S., & Garland Jr, T. (1994). Exercise physiology of wild and random-bred laboratory house mice and their reciprocal hybrids. American Journal of Physiology-Regulatory, Integrative and Comparative Physiology, 267(4), R1098-R1108.
Doll R (1998) Uncovering the effects of smoking: historical perspective. Statistical Methods in Medical Research 7:87-117
Earp, B. D. (2011). Can science tell us what’s objectively true. The New Collection, 6(1), 1-9.
Elwood JM (2013) Commentary: On representativeness. International Journal of Epidemiology 42:1014-1015.
Emanuel, E. J., Wendler, D., & Grady, C. (2000). What makes clinical research ethical? Journal of the American Medical Association, 283(20), 2701-2711.
Fang, L., Karakiulakis, G., & Roth, M. (2020). Are patients with hypertension and diabetes mellitus at increased risk for COVID-19 infection?. The Lancet. Respiratory Medicine, 8(4), e21.
Foster, K. A., Oster, C. G., Mayer, M. M., Avery, M. L., & Audus, K. L. (1998). Characterization of the A549 cell line as a type II pulmonary epithelial cell model for drug metabolism. Experimental cell research, 243(2), 359-366.
Freedman, B. (1987). Equipoise and the ethics of clinical research. The New England Journal of Medicine, 317:141-145.
Fritts TH, Rodda GH (1998) The role of introduced species in the degradation of island ecosystems: A case history of Guam. Annual Review of Ecology and Systematics 29:113-140.
Gabriella R (2012) Studying drugs in all the wrong people. Scientific American Mind 23:34-41.
Goodman, M., LaKind, J. S., Fagliano, J. A., Lash, T. L., Wiemels, J. L., Winn, D. M., … & Mattison, D. R. (2014). Cancer cluster investigations: review of the past and proposals for the future. International journal of environmental research and public health, 11(2), 1479-1499.
Hodge, F. S. (2012). No meaningful apology for American Indian unethical research abuses. Ethics & Behavior, 22(6), 431-444.
Holman, L., Head, M. L., Lanfear, R., & Jennions, M. D. (2015). Evidence of experimental bias in the life sciences: why we need blind data recording. PLoS Biology, 13(7), e1002190.
Houle David; Pélabon Christophe; Wagner Günter P. & Hansen, T. F. (2011) Measurement and meaning in biology. The Quarterly Review of Biology 86:3-34
Howard, D. H., Kenline, C., Lazarus, H. M., LeMaistre, C. F., Maziarz, R. T., McCarthy Jr, P. L., … & Majhail, N. S. (2011). Abandonment of high‐dose chemotherapy/hematopoietic cell transplants for breast cancer following negative trial results. Health services research, 46(6pt1), 1762-1777.
Jennings, S. and Reynolds, J. D. and Mills, S. C. (1998) Life history correlates of responses to fisheries exploitation. Proceedings of the Royal Society B: Biological Sciences 265:333-339
Johnston, R. F., Niles, D. M., & Rohwer, S. A. (1972). Hermon Bumpus and natural selection in the house sparrow Passer domesticus. Evolution, (26):20-31.
Kaptchuk, T. J. (2003). Effect of interpretive bias on research evidence. British Medical Journal, 326(7404), 1453-1455.
Kilkenny, C.; Browne, W. J.; Cuthill, I. C.; Emerson, M. & Altman, D. G. (2010) Improving bioscience research reporting: the ARRIVE guidelines for reporting animal research. PLoS Biology 8:e1000412
Lariviere WR, Chesler EJ, Mogil JS (2001) Transgenic Studies of Pain and Analgesia: Mutation or Background Genotype? Journal of Pharmacology and experimental therapeutics 297:467-473
Lazic SE (2010) The problem of pseudoreplication in neuroscientific studies: is it affecting your analysis? BMC Neuroscience 11:5
Losos, J. B., Creer, D. A., & Schulte Ii, J. A. (2002). Cautionary comments on the measurement of maximum locomotor capabilities. Journal of Zoology, 258(1), 57-61.
Luz, R. K., Martínez-Álvarez, R. M., De Pedro, N., & Delgado, M. J. (2008). Growth, food intake regulation and metabolic adaptations in goldfish (Carassius auratus) exposed to different salinities. Aquaculture, 276(1-4), 171-178.
Marshall, M., Ferguson, I. D., Lewis, P., Jaggi, P., Gagliardo, C., Collins, J. S., … & Guzman-Cottrill, J. A. (2021). Symptomatic acute myocarditis in seven adolescents following Pfizer-BioNTech COVID-19 vaccination. Pediatrics, 2.
McCambridge, J., Sorhaindo, A., Quirk, A., & Nanchahal, K. (2014). Patient preferences and performance bias in a weight loss trial with a usual care arm. Patient education and counseling, 95(2), 243-247.
Meehl, P. E. (1970). Nuisance variables and the ex post facto design. In M. Radner & S. Winokur (Eds.), Minnesota Studies in the philosophy of science: Vol. IV. Analyses of theories and methods of physics and psychology (pp. 373-402). Minneapolis: University of Minnesota Press.
Medical Research Council Investigation (1948). STREPTOMYCIN treatment of pulmonary tuberculosis. British medical journal, 2(4582), 769–782.
Milham S (2004). A cluster of male breast cancer in office workers. American Journal of Industrial Medicine 46:86-87.
Nelson MR, et al. (2008) The Population Reference Sample, POPRES: a resource for population, disease, and pharmacological genetics research. American Journal of Human Genetics 83:347-358
Nethery, R. C., Yang, Y., Brown, A. J., & Dominici, F. (2020). A causal inference framework for cancer cluster investigations using publicly available data. Journal of the Royal Statistical Society: Series A (Statistics in Society), 183(3), 1253-1272.
Nijhawan, L. P.; Janodia, M. D.; Muddukrishna, B. S.; Bhat, K. M.; Bairy, K. L.; Udupa, N. & Musmade, P. B. (2013) Informed consent: Issues and challenges. Journal of Advanced Pharmaceutical Technology & Research 4:134-140
O’Leary, S. T., & Maldonado, Y. A. (2021). Myocarditis After SARS-CoV-2 Vaccination: True, True, and… Related?. Pediatrics, 148(3).
Omair A. (2015) Selecting the appropriate study design for your research: Descriptive study designs. Journal of Health Specialties 3:153-156.
Omair A. (2016) Selecting the appropriate study design: Case–control and cohort study designs. Journal of Health Specialties 4:37-41.
Pannucci, C. J. & Wilkins, E. G. (2010) Identifying and avoiding bias in research. Plastic and Reconstructive Surgery 126, 619-625
Pool, R. (1990). Is there an EMF-cancer connection? Science, 249(4973), 1096-1099.
Reader RJ (1992) Herbivory as a confounding factor in an experiment measuring competition among plants. Ecology 73(1):373-376
Roelcke, V. (2004). Nazi medicine and research on human beings. The Lancet, 364, 6-7.
Rothman KJ, Gallacher JEJ, Hatch EE (2013) Why representativeness should be avoided. International Journal of Epidemiology 42:1012-1014.
Rothwell, E., Brassil, D., Barton-Baxter, M., Brownley, K. A., Dickert, N. W., Ford, D. E., … & Wilfond, B. S. (2021). Informed consent: Old and new challenges in the context of the COVID-19 pandemic. Journal of Clinical and Translational Science, 5(1).
Scott, A. F. (1999). Malformed southern leopard frogs (Rana sphenocephala utricularius). Journal of the Tennessee Academy of Science, 74(3-4), 61-63.
Shuster E. (1997) Fifty Years Later: The Significance of the Nuremberg Code. The New England Journal of Medicine 337: 1436-1440.**
Sigmund CD (2000) Viewpoint: Are studies in genetically altered mice out of control? Arteriosclerosis, Thrombosis, and Vascular Biology 20:1425-1429
Simons, D. J. (2014). The value of direct replication. Perspectives on psychological science, 9(1), 76-80.
Stephens PA, Buskirk SW, del Rio CM (2006) Inference in ecology and evolution. Trends in Ecology & Evolution 22:192-197
Stevens, S. S. (1946) On the Theory of Scales of Measurement. Science 103:677-680
Suba, E. J. US-funded measurements of cervical cancer death rates in India: scientific and ethical concerns. Indian Journal of Medical Ethics11:167-175.
Temple R & Ellenberg, S. (2000) Placebo-controlled trials and active-control trials in the evaluation of new treatments. Part 1: ethical and scientific issues. Annals of Internal Medicine 133: 455-463
Tension headache
. Symptoms.
. Retrieved from: http://www.mayoclinic.org/diseases-conditions/tension-headache/basics/symptoms/con-20014295
Thomas, M., & Bomar, P. A. (2018). Upper Respiratory Tract Infection. In StatPearls . StatPearls Publishing. At https://www.ncbi.nlm.nih.gov/books/NBK532961/
Thompson, C. B., & Panacek, E. A. (2006). Research study designs: experimental and quasi-experimental. Air medical journal, 25(6), 242-246.
Thompson SJ, Auslander WF, White NH. 2001. Comparison of Single-Mother and Two-Parent Families on Metabolic Control of Children With Diabetes. Diabetes Care 24(2): 234-238.
Tignanelli, C. J., Ingraham, N. E., Sparks, M. A., Reilkoff, R., Bezdicek, T., Benson, B., … & Puskarich, M. A. (2020). Antihypertensive drugs and risk of COVID-19?. The Lancet Respiratory Medicine. 8:e30-e31.
Treece, J. W. Jr (1990, retrieved January 9 2023). Daniel and the Classic Experimental Design. Institute and Creation Research https://www.theoceancleanup.com/updates/whales-likely-impacted-by-great-pacific-garbage-patch/
Tyrer, S., & Heyman, B. (2016). Sampling in epidemiological research: issues, hazards and pitfalls. BJ Psych Bulletin, 40(2), 57-60.
Valerio, M. A., Rodriguez, N., Winkler, P., Lopez, J., Dennison, M., Liang, Y., & Turner, B. J. (2016). Comparing two sampling methods to engage hard-to-reach communities in research priority setting. BMC Medical Research Methodology, 16(1), 146.
Vaux, D. L., Fidler, F., & Cumming, G. (2012). Replicates and repeats—what is the difference and is it significant? A brief discussion of statistics and experimental design. EMBO reports, 13(4), 291-296.
Wacholder, S., McLaughlin, J. K., Silverman, D. T., & Mandel, J. S. (1992). Selection of controls in case-control studies: I. Principles. American journal of epidemiology, 135(9), 1019-1028.
Wacholder, S., Silverman, D. T., McLaughlin, J. K., & Mandel, J. S. (1992). Selection of controls in case-control studies: II. Types of controls. American journal of epidemiology, 135(9), 1029-1041.
Wacholder, S., Silverman, D. T., McLaughlin, J. K., & Mandel, J. S. (1992). Selection of controls in case-control studies: III. Design options. American journal of epidemiology, 135(9), 1042-1050.
Walker, G. (2009). Beyond distribution and proximity: exploring the multiple spatialities of environmental justice. Antipode, 41(4), 614-636.
Wang, Y., Zhang, D., Du, G., Du, R., Zhao, J., Jin, Y., … & Hu, Y. (2020). Remdesivir in adults with severe COVID-19: a randomised, double-blind, placebo-controlled, multicentre trial. The Lancet.
Whitley E, Ball J (2002) Statistics review 2: Samples and populations. Critical Care 6:43-48.
Zeilinger, J., Steger‐Hartmann, T., Maser, E., Goller, S., Vonk, R., & Länge, R. (2009). Effects of synthetic gestagens on fish reproduction. Environmental toxicology and chemistry, 28(12), 2663-2670.
Zoorob, R., Sidani, M. A., Fremont, R. D., & Kihlberg, C. (2012). Antibiotic use in acute upper respiratory tract infections. American family physician, 86(9), 817-822.